代表性论文 |
2018-2022年（第一作者或通讯作者，†第一作者，*通讯作者） 1. Guo L, Wang S, Nie Y, Shen Y, Ye X,Wu W*. Convergent evolution of AP2/ERF III and IX subfamilies recurrently through polyploidization and tandem duplication in eudicot adaptation to paleoenvironmental changes.Plant communications2022.10.1016/j.xplc.2022.100420 2. Nie Y, Guo L, Cui F, Shen Y, Ye X, Deng D, Wang S*, Zhu J*,Wu W*. Innovations and Stepwise Evolution of CBFs/DREB1s and Their Regulatory Networks in Angiosperms.J Integr Plant Biol2022.10.1111/jipb.13357 3. Ye X, Wang S, Zhao X, Gao N, Wang Y, Yang Y, Wu E, Jiang C, Cheng Y,Wu W*, Liu S*. Role of lncRNAs in cis- and trans-regulatory responses to salt inPopulus trichocarpa.Plant J2022, 110(4): 978-993. 4. Cui F†, Li X†,Wu W†, Luo W, Wu Y, Brosche M, Overmyer K. Ectopic expression of BOTRYTIS SUSCEPTIBLE1 reveals its function as a positive regulator of wound-induced cell death and plant susceptibility to Botrytis.Plant Cell2022.10.1093/plcell/koac206 5. Wang S, Shen Y, Guo L, Tan L, Ye X, Yang Y, Zhao X, Nie Y, Deng D, Liu S*,Wu W*. Innovation and Emerging Roles ofPopulus trichocarpaTEOSINTE BRANCHED1/CYCLOIDEA/PROLIFERATING CELL FACTOR Transcription Factors in Abiotic Stresses by Whole-Genome Duplication.Front Plant Sci2022, 13: 850064. 6. Ye X, Zhao X, Sun Y, Zhang M, Feng S, Zhou A,Wu W*, Ma S*, Liu S*. The underlying molecular conservation and diversification of dioecious flower and leaf buds provide insights into the development, dormancy breaking, flowering, and sex association of willows.Plant Physiol Biochem2021, 167: 651-664. 7. Zhao X, Tan L, Wang S, Shen Y, Guo L, Ye X, Liu S, Feng Y*,Wu W*. The SR Splicing Factors: Providing Perspectives on Their Evolution, Expression, Alternative Splicing, and Function inPopulus trichocarpa.Int J Mol Sci2021, 22(21): 11369. 8. Zhang C, Shen L, Yuan W, Liu Y, Guo R, Luo Y, Zhan Z, Xie Z, Wu G,Wu W*, Feng Y*. Loss of SRSF2 triggers hepatic progenitor cell activation and tumor development in mice.Commun Biol2020, 3(1): 210. 9. 杨艳梅,赵喜娟,聂语琪,柳参奎,吴文武*.草本拟南芥和木本毛果杨在冷胁迫下的研究进展.分子植物育种2020, 18(17): 5755-5764. 10. Wu W*†, Zong J†, Wei N, Cheng J, Zhou X, Cheng Y, Chen D, Guo Q, Zhang B, Feng Y*. CASH: a constructing comprehensive splice site method for detecting alternative splicing events.Brief Bioinform2018, 19(5): 905-917. 11. He L†,Wu W†, Zinta G, Yang L, Wang D, Liu R, Zhang H, Zheng Z, Huang H, Zhang Q, Zhu JK. A naturally occurring epiallele associates with leaf senescence and local climate adaptation inArabidopsisaccessions.Nat Commun2018, 9(1): 460. 2017年及以前（第一作者或通讯作者，†第一作者，*通讯作者） 12. Luo C, Cheng Y, Liu Y, Chen L, Liu L, Wei N, Xie Z,Wu W*, Feng Y*. SRSF2 regulates alternative splicing to drive hepatocellular carcinoma development.Cancer Res2017, 77(5): 1168-1178. 13. Cheng J†, Xu Z†,Wu W†, Zhao L, Li X, Liu Y, Tao S. Training set selection for the prediction of essential genes.PLoS One2014, 9(1): e86805. 14. Zhou X†,Wu W†, Li H, Cheng Y, Wei N, Zong J, Feng X, Xie Z, Chen D, Manley JL, Wang H, Feng Y. Transcriptome analysis of alternative splicing events regulated by SRSF10 reveals position-dependent splicing modulation.Nucleic Acids Res2014, 42(6): 4019-4030. 15. Cheng J,Wu W†, Zhang Y, Li X, Jiang X, Wei G, Tao S. A new computational strategy for predicting essential genes.BMC Genomics2013, 14: 910. 16. Wu W, Huang X, Cheng J, Li Z, de Folter S, Huang Z, Jiang X, Pang H, Tao S. Conservation and Evolution in and among SRF- and MEF2-Type MADS Domains and Their Binding Sites.Mol Biol Evol2011, 28(1): 501-511. 17. Wu W, de Folter S, Shen X, Zhang W, Tao S. Vertebrate Paralogous MEF2 Genes: Origin, Conservation, and Evolution.PLoS One2011, 6(3): e17334. 18. Wu W, Shen X, Tao S. Characteristics of the CArG-SRF binding context in mammalian genomes.Mamm Genome2010, 21(1): 104-113. 其他作者论文 1. Cui X, Gao K, Wang L, Lv M, Li Z, Zheng D,Wu W, Yao W, Ding L, Li X, Others. General Control Non-derepressible 1 (AtGCN1) Is Important for Flowering Time, Plant Growth, Seed Development, and the Transcription/Translation of Specific Genes in Arabidopsis.Front Plant Sci2021, 12: 239. 2. Zhong Y, Xie J, Wen S,Wu W, Tan L, Lei M, Shi H, Zhu J. TPST is involved in fructose regulation of primary root growth in Arabidopsis thaliana.Plant Mol Biol2020, 103(4): 511-525. 3. Yu H, Kong X, Huang H,Wu W, Park J, Yun D, Lee B, Shi H, Zhu J. STCH4/REIL2 confers cold stress tolerance in Arabidopsis by promoting rRNA processing and CBF protein translation.Cell Rep2020, 30(1): 229-242. 4. Cui F,Wu W, Wang K, Zhang Y, Hu Z, Brosch E M, Liu S, Overmyer K. Cell death regulation but not abscisic acid signaling is required for enhanced immunity to Botrytis in Arabidopsis cuticle-permeable mutants.J Exp Bot2019, 70(20): 5971-5984. 5. Wang Q, Wang Y, Liu Y, Zhang C, Luo Y, Guo R, Zhan Z, Wei N, Xie Z, Shen L, Others. U2-related proteins CHERP and SR140 contribute to colorectal tumorigenesis via alternative splicing regulation.Int J Cancer2019, 145(10): 2728-2739. 6. Ye X, Wang H, Cao X, Jin X, Cui F, Bu Y, Liu H,Wu W, Takano T, Liu S. Transcriptome profiling of Puccinellia tenuiflora during seed germination under a long-term saline-alkali stress.Bmc Genomics2019, 20(1): 1-17. 7. Liu L, Luo C, Luo Y, Chen L, Liu Y, Wang Y, Han J, Zhang Y, Wei N, Xie Z,Wu W, Wu G, Feng Y. MRPL33 and its splicing regulator hnRNPK are required for mitochondria function and implicated in tumor progression.Oncogene2018, 37(1): 86-94. 8. Wang L, Li H, Zhao C, Li S, Kong L,Wu W, Kong W, Liu Y, Wei Y, Zhu JK, Zhang H. The inhibition of protein translation mediated by AtGCN1 is essential for cold tolerance in Arabidopsis thaliana.Plant Cell Environ2017, 40(1): 56-68. 9. Yang R, Zheng Z, Chen Q, Yang L, Huang H, Miki D,Wu W, Zeng L, Liu J, Zhou JX, Ogas J, Zhu JK, He XJ, Zhang H. The developmental regulator PKL is required to maintain correct DNA methylation patterns at RNA-directed DNA methylation loci.Genome Biol2017, 18(1): 103. 10. Cao MJ, Zhang YL, Liu X, Huang H, Zhou XE, Wang WL, Zeng A, Zhao CZ, Si T, Du J,Wu W, Wang FX, Xu HE, Zhu JK. Combining chemical and genetic approaches to increase drought resistance in plants.Nat Commun2017, 8(1): 1183. 11. Chen L, Luo C, Shen L, Liu Y, Wang Q, Zhang C, Guo R, Zhang Y, Xie Z, Wei N, Others. SRSF1 prevents DNA damage and promotes tumorigenesis through regulation of DBF4B pre-mRNA splicing.Cell Rep2017, 21(12): 3406-3413. 12. Cheng Y, Luo C,Wu W, Xie Z, Fu X, Feng Y. Liver-Specific Deletion of SRSF2 Caused Acute Liver Failure and Early Death in Mice.Mol Cell Biol2016, 36(11): 1628-1638. 13. Zhan X, Qian B, Cao F,Wu W, Yang L, Guan Q, Gu X, Wang P, Okusolubo TA, Dunn SL, Zhu JK, Zhu J. An Arabidopsis PWI and RRM motif-containing protein is critical for pre-mRNA splicing and ABA responses.Nat Commun2015, 6: 8139. 14. Zhou X,Wu W, Wei N, Cheng Y, Xie Z, Feng Y. Genome-wide analysis of SRSF10-regulated alternative splicing by deep sequencing of chicken transcriptome.Genomics Data2014, 2(0): 20-23. 15. Zhou X, Li X, Cheng Y,Wu W, Xie Z, Xi Q, Han J, Wu G, Fang J, Feng Y. BCLAF1 and its splicing regulator SRSF10 regulate the tumorigenic potential of colon cancer cells.Nat Commun2014, 5: 4581. 16. Li H, Cheng Y,Wu W, Liu Y, Wei N, Feng X, Xie Z, Feng Y. SRSF10 Regulates Alternative Splicing and Is Required for Adipocyte Differentiation.Mol Cell Biol2014, 34(12): 2198-2207. 17. Li L, Guo Y,Wu W, Shi Y, Cheng J, Tao S. A comparison and evaluation of five biclustering algorithms by quantifying goodness of biclusters for gene expression data.Biodata Min2012, 5(1): 8. 18. Marsch-Martínez N,Wu W, de Folter S. The MADS symphonies of transcriptional regulation.Front Plant Sci2011, 2: 26. |
